Tree log – file name
Name of the file, or stdout if left blank. File names can be parameterised, and there are a few build-in parameters:
$(filebase)
is replaced by the XML file name minus.xml
$(seed)
is replaced by the random number seed
So, if you set the file name to $(filebase)-$(seed).trees
and use a file beast.xml
with seed 123
it saves the tree log in beast-123.trees
.
You can also define your own parameters, and run BEAST with the -D
option to define the parameter.
For instance, setting the file name to $(filebase)-$(run).trees
and running BEAST with
beast -D run=76 beast.xml
results in the tree file being written in beast-76.trees
.
See also trace file name.